COVID19Waves, The starting dates of COVID-19 multiple waves
type: DataCatalog
description: The COVID19Waves GitHub repository contains a set of Matlab codes that can be used to fit a multi-wave statistical model to the complex data arising from the COVID-19 epidemic dynamics. The repository also contains data referring to a case study involving the city of Rio de Janeiro in Brazil.
conforms to: Schema.org
conforms to: Bioschemas Dataset Profile
conforms to: DCMI Metadata Terms
conforms to: Data Catalog Vocabulary
conforms to: DataCite Metadata Schema
conforms to: PROV Ontology
conforms to: PAV Ontology
conforms to: MIDAS Metadata Vocabulary
conforms to: Open Biological and Biomedical Ontology
conforms to: GeoNames Ontology
conforms to: HL7 FHIR
conforms to: SNOMED Clinical Terms
conforms to: Logical Observation Identifiers Names and Codes
conforms to: MIDAS Catalog JSON-LD Schema
included in data catalog: MIDAS Catalog
  type: DataCatalog
  source: https://catalog.midasnetwork.us/
about: population
about: Homo sapiens
about: modeling method
about: pathogen
about: COVID-19
about: statistical model
about: disease
about: viral respiratory tract infection
about: repository
about: infectious disease
about: vaccine-preventable Disease
about: viral Infectious disease
about: modeling
about: Viruses
about: Severe acute respiratory syndrome coronavirus 2
about: host organism
subject: viral Infectious disease
subject: modeling
subject: host organism
subject: disease
subject: viral respiratory tract infection
subject: Viruses
subject: pathogen
subject: repository
subject: statistical model
subject: Homo sapiens
subject: modeling method
subject: vaccine-preventable Disease
subject: COVID-19
subject: infectious disease
subject: Severe acute respiratory syndrome coronavirus 2
subject: population
access URL: https://github.com/americocunhajr/COVID19Waves
landing page: https://github.com/americocunhajr/COVID19Waves
endpoint URL: https://github.com/americocunhajr/COVID19Waves
abstract: Landing page where users can browse and download dataset files in various formats.
endpoint description: Landing page where users can browse and download dataset files in various formats.
language: English
creator: Paulo Roberto de Lima Gianfelice
creator: Ricardo Sovek Oyarzabal
creator: Americo Cunha Jr
creator: Elbert E. N. Macau
creator: Fernando da Conceição Batista
creator: Jose Mario Vicensi Grzybowsk

Schema.org
type: Standard
description: Schema.org vocabulary for structured data on the web
subject: sciences
subject: web
type: generic

Bioschemas Dataset Profile
type: Standard
description: A structured data markup specification for describing datasets in the life sciences, extending schema.org Dataset
subject: bioinformatics
subject: life sciences
subject: structured data
type: metadata schema

DCMI Metadata Terms
type: Standard
description: Dublin Core Metadata Initiative Terms - refined elements for precise resource description
subject: metadata
subject: resource description
subject: interoperability
subject: digital libraries
type: metadata schema

Data Catalog Vocabulary
type: Standard
description: W3C Data Catalog Vocabulary for describing data catalogs
subject: sciences
subject: data management
type: generic

DataCite Metadata Schema
type: Standard
description: DataCite metadata schema for research data citation
subject: research data
subject: data citation
type: domain-specific

PROV Ontology
type: Standard
description: W3C Provenance Ontology for describing provenance information
subject: sciences
subject: epidemiology
type: generic

PAV Ontology
type: Standard
description: Provenance, Authoring and Versioning ontology for metadata about web resources
subject: provenance
subject: versioning
subject: authoring
subject: metadata
type: metadata schema

MIDAS Metadata Vocabulary
type: Standard
description: Custom MIDAS vocabulary for epidemiological data and modeling
subject: epidemiology
subject: public health
subject: infectious diseases
type: domain-specific

Open Biological and Biomedical Ontology
type: Standard
description: OBO Foundry ontologies for life sciences and biomedical research
subject: life sciences
subject: biomedical
subject: epidemiology
type: domain-specific

GeoNames Ontology
type: Standard
description: GeoNames geographical database ontology
subject: geography
subject: spatial data
type: domain-specific

HL7 FHIR
type: Standard
description: Health Level 7 Fast Healthcare Interoperability Resources
subject: healthcare
subject: medical informatics
type: domain-specific

SNOMED Clinical Terms
type: Standard
description: Systematized Nomenclature of Medicine Clinical Terms
subject: healthcare
subject: clinical terminology
type: domain-specific

Logical Observation Identifiers Names and Codes
type: Standard
description: LOINC database for laboratory and clinical observations
subject: healthcare
subject: laboratory
subject: clinical
type: domain-specific

MIDAS Catalog JSON-LD Schema
type: Standard
description: JSON Schema (Draft 2020-12) defining the structure of MIDAS Catalog JSON-LD metadata records
subject: epidemiology
subject: metadata
subject: data validation
type: metadata schema

population
type: DefinedTerm
alternate name: Population

Homo sapiens
type: DefinedTerm
description: Members of the species Homo sapiens.
alternate name: Homo sapiens

modeling method
type: DefinedTerm
description: The method or type of model used to achieve the purpose.
alternate name: Modeling Method

pathogen
type: DefinedTerm
description: An organism of a particular biological taxon that is the bearer of an infectious dispositions towards an organism of a different particular biological taxon.
alternate name: Pathogen

COVID-19
type: DefinedTerm
description: A Coronavirus infection that is characterized by fever, cough and shortness of breath and that has_material_basis_in SARS-CoV-2.
alternate name: COVID-19

statistical model
type: DefinedTerm
description: a statistical model is an information content entity which is a formalization of relationships between variables in the form of mathematical equations. A statistical model describes how one or more random variables are related to one or more other variables. The model is statistical as the variables are not deterministically but stochastically related.
alternate name: Statistical Model

disease
type: DefinedTerm
description: A disease is a disposition (i) to undergo pathological processes that (ii) exists in an organism because of one or more disorders in that organism.
alternate name: Disease

viral respiratory tract infection
type: DefinedTerm
description: A respiratory tract infection caused by a virus. Viruses represent the most common causes of upper and lower respiratory tract infections and include rhinoviruses, influenza viruses, parainfluenza viruses, and respiratory syncytial virus.
alternate name: Viral Respiratory Tract Infection

Rio de Janeiro
type: GeoShape
address country: BR

repository
type: DefinedTerm
description: A collection of information in various types of structured or non-structured formats.
alternate name: Repository

infectious disease
type: DefinedTerm
description: A disease whose physical basis is an infectious disorder
alternate name: Infectious Disease

vaccine-preventable Disease
type: DefinedTerm
description: Vaccine preventable diseases are those infectious diseases that can be prevented by vaccination
alternate name: Vaccine-Preventable Disease

viral Infectious disease
type: DefinedTerm
description: Any disease caused by a virus.
alternate name: Viruses Infection

modeling
type: DefinedTerm
description: Descriptors of the behavior of an outbreak
alternate name: Modeling

Viruses
type: DefinedTerm
description: Minute infectious agents whose genomes are composed of DNA or RNA, but not both. They are characterized by a lack of independent metabolism and the inability to replicate outside living host cells.
alternate name: Viruses

Severe acute respiratory syndrome coronavirus 2
type: DefinedTerm
description: A species of BETACORONAVIRUS causing atypical respiratory disease (COVID-19) in humans. The organism was first identified in 2019 in Wuhan, China. The natural host is the Chinese intermediate horseshoe bat, RHINOLOPHUS affinis.
alternate name: SARS-CoV2

host organism
type: DefinedTerm
description: An organism of a particular biological taxon that is the site of reproduction of an organism of a different taxon.
alternate name: Host

English
type: Language

Paulo Roberto de Lima Gianfelice
type: Person
type: Agent

Ricardo Sovek Oyarzabal
type: Person
type: Agent

Americo Cunha Jr
type: Person
type: Agent

Elbert E. N. Macau
type: Person
type: Agent

Fernando da Conceição Batista
type: Person
type: Agent

Jose Mario Vicensi Grzybowsk
type: Person
type: Agent

datePublished
date: 2023-01-19

datePublished
date: 2022-05-06

Apache 2.0
type: CreativeWork

MIT License
type: CreativeWork

National Institute of General Medical Sciences
type: Organization

MIDAS COORDINATION CENTER
type: Organization
source: https://midasnetwork.us/
location: PostalAddress
  street address: 5607 Baum Blvd
  address locality: Pittsburgh
  address region: PA
  address country: United States of America
  postal code: 15206

Place
geo: Rio de Janeiro
feature code: ADM1

City
type: Place

The starting dates of COVID-19 multiple waves
type: CreativeWork
description: Associated publication
source: https://aip.scitation.org/doi/10.1063/5.0079904
type: Entity
property value: DOI
type: Agent

epidWaves: A code for fitting multi-wave epidemic models is
type: CreativeWork
description: COVID19Waves material was incoporated into a novel and improved package called epidWaves.
source: https://github.com/americocunhajr/epidWaves
license: MIT License
type: Entity
property value: DOI
license:
  name: MIT License
type: Agent
license:
  name: MIT License

about-property-structure
type: PropertyValue
description: The 'about' property contains mixed types: DefinedTerm objects represent subject matter/topics, while Place objects represent geographical scope or applicability

Place
geo: Rio de Janeiro
feature code: ADM1