CORD-19: The Covid-19 Open Research Dataset
type: DataCatalog
description: The Covid-19 Open Research Dataset (CORD-19) contains all COVID-19 and coronavirus-related research (e.g. SARS, MERS, etc.) from multiple sources: PubMed, bioRxiv pre-prints, and medRxiv pre-prints using this query: COVID-19 and coronavirus research. The dataset contains also the COVID-19 research articles from a corpus maintained by the WHO. The database provides also comprehensible metadata file with specific licensing information for individual articles.
conforms to: Schema.org
conforms to: Bioschemas Dataset Profile
conforms to: DCMI Metadata Terms
conforms to: Data Catalog Vocabulary
conforms to: DataCite Metadata Schema
conforms to: PROV Ontology
conforms to: PAV Ontology
conforms to: MIDAS Metadata Vocabulary
conforms to: Open Biological and Biomedical Ontology
conforms to: HL7 FHIR
conforms to: SNOMED Clinical Terms
conforms to: Logical Observation Identifiers Names and Codes
conforms to: MIDAS Catalog JSON-LD Schema
included in data catalog: MIDAS Catalog
  type: DataCatalog
  source: https://catalog.midasnetwork.us/
about: viral Infectious disease
about: molecular
about: Severe acute respiratory syndrome coronavirus 2
about: COVID-19
about: disease
about: Homo sapiens
about: Viruses
about: population
about: pathogen
about: literature
about: infectious disease
about: catalog
about: viral respiratory tract infection
about: disease-specific collection
about: vaccine-preventable Disease
about: host organism
subject: viral Infectious disease
subject: host organism
subject: disease
subject: catalog
subject: Viruses
subject: viral respiratory tract infection
subject: disease-specific collection
subject: pathogen
subject: Homo sapiens
subject: vaccine-preventable Disease
subject: COVID-19
subject: literature
subject: molecular
subject: infectious disease
subject: Severe acute respiratory syndrome coronavirus 2
subject: population
access URL: https://github.com/allenai/cord19
landing page: https://github.com/allenai/cord19
endpoint URL: https://github.com/allenai/cord19
abstract: Landing page where users can browse and download dataset files in various formats.
endpoint description: Landing page where users can browse and download dataset files in various formats.
language: English
creator: Daniel S Weld
creator: Alex D Wade
creator: Lucy Lu Wang
creator: Sebastian Kohlmeier
creator: Paul Mooney
creator: Zhihong Shen
creator: Brandon Stilson

Schema.org
type: Standard
description: Schema.org vocabulary for structured data on the web
subject: sciences
subject: web
type: generic

Bioschemas Dataset Profile
type: Standard
description: A structured data markup specification for describing datasets in the life sciences, extending schema.org Dataset
subject: bioinformatics
subject: life sciences
subject: structured data
type: metadata schema

DCMI Metadata Terms
type: Standard
description: Dublin Core Metadata Initiative Terms - refined elements for precise resource description
subject: metadata
subject: resource description
subject: interoperability
subject: digital libraries
type: metadata schema

Data Catalog Vocabulary
type: Standard
description: W3C Data Catalog Vocabulary for describing data catalogs
subject: sciences
subject: data management
type: generic

DataCite Metadata Schema
type: Standard
description: DataCite metadata schema for research data citation
subject: research data
subject: data citation
type: domain-specific

PROV Ontology
type: Standard
description: W3C Provenance Ontology for describing provenance information
subject: sciences
subject: epidemiology
type: generic

PAV Ontology
type: Standard
description: Provenance, Authoring and Versioning ontology for metadata about web resources
subject: provenance
subject: versioning
subject: authoring
subject: metadata
type: metadata schema

MIDAS Metadata Vocabulary
type: Standard
description: Custom MIDAS vocabulary for epidemiological data and modeling
subject: epidemiology
subject: public health
subject: infectious diseases
type: domain-specific

Open Biological and Biomedical Ontology
type: Standard
description: OBO Foundry ontologies for life sciences and biomedical research
subject: life sciences
subject: biomedical
subject: epidemiology
type: domain-specific

HL7 FHIR
type: Standard
description: Health Level 7 Fast Healthcare Interoperability Resources
subject: healthcare
subject: medical informatics
type: domain-specific

SNOMED Clinical Terms
type: Standard
description: Systematized Nomenclature of Medicine Clinical Terms
subject: healthcare
subject: clinical terminology
type: domain-specific

Logical Observation Identifiers Names and Codes
type: Standard
description: LOINC database for laboratory and clinical observations
subject: healthcare
subject: laboratory
subject: clinical
type: domain-specific

MIDAS Catalog JSON-LD Schema
type: Standard
description: JSON Schema (Draft 2020-12) defining the structure of MIDAS Catalog JSON-LD metadata records
subject: epidemiology
subject: metadata
subject: data validation
type: metadata schema

viral Infectious disease
type: DefinedTerm
description: Any disease caused by a virus.
alternate name: Viruses Infection

molecular
type: DefinedTerm
alternate name: Molecular

Severe acute respiratory syndrome coronavirus 2
type: DefinedTerm
description: A species of BETACORONAVIRUS causing atypical respiratory disease (COVID-19) in humans. The organism was first identified in 2019 in Wuhan, China. The natural host is the Chinese intermediate horseshoe bat, RHINOLOPHUS affinis.
alternate name: SARS-CoV2

COVID-19
type: DefinedTerm
description: A Coronavirus infection that is characterized by fever, cough and shortness of breath and that has_material_basis_in SARS-CoV-2.
alternate name: COVID-19

disease
type: DefinedTerm
description: A disease is a disposition (i) to undergo pathological processes that (ii) exists in an organism because of one or more disorders in that organism.
alternate name: Disease

Homo sapiens
type: DefinedTerm
description: Members of the species Homo sapiens.
alternate name: Homo sapiens

Viruses
type: DefinedTerm
description: Minute infectious agents whose genomes are composed of DNA or RNA, but not both. They are characterized by a lack of independent metabolism and the inability to replicate outside living host cells.
alternate name: Viruses

population
type: DefinedTerm
alternate name: Population

pathogen
type: DefinedTerm
description: An organism of a particular biological taxon that is the bearer of an infectious dispositions towards an organism of a different particular biological taxon.
alternate name: Pathogen

literature
type: DefinedTerm
description: Collections of entities from the research literature, or derived from the literature.
alternate name: Literature

infectious disease
type: DefinedTerm
description: A disease whose physical basis is an infectious disorder
alternate name: Infectious Disease

catalog
type: DefinedTerm
description: A collection of links to other data items, often found in external repositories. No claims are made as to the format or consistency of the items associated with those links.
alternate name: Catalog

viral respiratory tract infection
type: DefinedTerm
description: A respiratory tract infection caused by a virus. Viruses represent the most common causes of upper and lower respiratory tract infections and include rhinoviruses, influenza viruses, parainfluenza viruses, and respiratory syncytial virus.
alternate name: Viral Respiratory Tract Infection

disease-specific collection
type: DefinedTerm
description: A catalog focused on a specific disease.
alternate name: Disease-Specific Collection

vaccine-preventable Disease
type: DefinedTerm
description: Vaccine preventable diseases are those infectious diseases that can be prevented by vaccination
alternate name: Vaccine-Preventable Disease

host organism
type: DefinedTerm
description: An organism of a particular biological taxon that is the site of reproduction of an organism of a different taxon.
alternate name: Host

English
type: Language

Daniel S Weld
type: Person
type: Agent

Alex D Wade
type: Person
type: Agent

Lucy Lu Wang
type: Person
type: Agent

datePublished
date: 2022-06-02

datePublished
date: 2021-06-03

Apache 2.0
type: CreativeWork

Apache License Version 2.0
type: CreativeWork

National Institute of General Medical Sciences
type: Organization

MIDAS COORDINATION CENTER
type: Organization
source: https://midasnetwork.us/
location: PostalAddress
  street address: 5607 Baum Blvd
  address locality: Pittsburgh
  address region: PA
  address country: United States of America
  postal code: 15206

CORD-19: The Covid-19 Open Research Dataset
type: CreativeWork
description: Associated publication
type: Entity
property value: URL
type: Agent

creation-activity
type: Activity
used: CORD-19: The Covid-19 Open Research Dataset
was associated with: Lucy Lu Wang
was associated with: Kyle Lo
was associated with: Yoganand Chandrasekhar
was associated with: Russell Reas
was associated with: Jiangjiang Yang
was associated with: Doug Burdick
was associated with: Darrin Eide
was associated with: Kathryn Funk
was associated with: Yannis Katsis
was associated with: Rodney Kinney
was associated with: Yunyao Li
was associated with: Ziyang Liu
was associated with: William Merrill
was associated with: Paul Mooney
was associated with: Dewey Murdick
was associated with: Devvret Rishi
was associated with: Jerry Sheehan
was associated with: Zhihong Shen
was associated with: Brandon Stilson
was associated with: Alex D Wade
was associated with: Kuansan Wang
was associated with: Nancy Xin Ru Wang
was associated with: Chris Wilhelm
was associated with: Boya Xie
was associated with: Douglas Raymond
was associated with: Daniel S Weld
was associated with: Oren Etzioni
was associated with: Sebastian Kohlmeier

about-property-structure
type: PropertyValue
description: The 'about' property contains mixed types: DefinedTerm objects represent subject matter/topics, while Place objects represent geographical scope or applicability

Boya Xie
type: Person

Darrin Eide
type: Person

Dewey Murdick
type: Person

Jerry Sheehan
type: Person

Yoganand Chandrasekhar
type: Person

Kuansan Wang
type: Person

Sebastian Kohlmeier
type: Person

Russell Reas
type: Person

Kathryn Funk
type: Person

Jiangjiang Yang
type: Person

Doug Burdick
type: Person

Paul Mooney
type: Person

Devvret Rishi
type: Person

Ziyang Liu
type: Person

Brandon Stilson
type: Person

William Merrill
type: Person

Chris Wilhelm
type: Person

Kyle Lo
type: Person

Yannis Katsis
type: Person

Oren Etzioni
type: Person

Douglas Raymond
type: Person

Yunyao Li
type: Person

Zhihong Shen
type: Person

Rodney Kinney
type: Person

Nancy Xin Ru Wang
type: Person