population

A flexible scenario modeling pipeline that tailors models for decision makers seeking to compare projections of epidemic trajectories and healthcare impacts from multiple intervention scenarios in different locations. It projects epidemic trajectories and healthcare impacts under different suites of interventions in order to aid in scenario planning. The model is generic enough to be applied to different spatial scales given shapefiles, population data, and COVID-19 confirmed case data.

non-collection specific

(Simple) Released

English

GNU GPL v3

Johns Hopkins University Infectious Disease Dynamics - COVID-19

COVID Scenario Pipeline

Information about capacity, including hospital beds, PPE supplies, nursing home capacity, testing sites, therapeutics, etc.

health system capacity

Counts of cases, deaths, etc. Often includes multiple types of counts as not compatible with more specific labels. Information about diagnostic tests, results, including serology tests, PCR, and other tests. Can include various methods of estimation, including the COVID-19 Forecast and Scenario Hubs.

case counts

A dataset that is about two or more hospital stays involving two or more patients.

hospital stay dataset

A data set that is about either some mortality rate or the death events themselves of some individuals of a given population of a particular biological taxon.

mortality data

Descriptors of the behavior of an outbreak.

modeling

The method or type of model used to achieve the purpose.

modeling method

Forecasts based on SIR (Susceptible, Infected, Recovered) models or any of the many variants of this basic famework.

compartmental models

modeling purpose

Projections of outbreak behavior into some future time, determined relative to a defined starting point. Might include retrospective projects or projections for current activitiy (known as &quot;now-casting&quot;).

forecasting

An organism of a particular biological taxon that is the bearer of an infectious dispositions towards an organism of a different particular biological taxon.

pathogen

Severe acute respiratory syndrome coronavirus 2

An organism of a particular biological taxon that is the site of reproduction of an organism of a different taxon.

host organism

Homo sapiens

A disease is a disposition (i) to undergo pathological processes that (ii) exists in an organism because of one or more disorders in that organism.

disease

A disease whose physical basis is an infectious disorder.

infectious disease

A Coronavirus infection that is characterized by fever, cough and shortness of breath and that has_material_basis_in SARS-CoV-2.

COVID-19

Software is a plan specification composed of a series of instructions that can be interpreted by or directly executed by a processing unit.

Identifier	URL:https://github.com/HopkinsIDD/COVIDScenarioPipeline
Type	software
Biological Scale	population
Collection End Date
Language	English
Topics	case counts hospital stay dataset mortality data disease infectious disease COVID-19 health system capacity host organism Homo sapiens modeling modeling method compartmental models modeling purpose forecasting pathogen Severe acute respiratory syndrome coronavirus 2
Geographical Scope
Geographical Resolution
Start Date
End Date
Version	1.0
Accessible For Free	TRUE
License	GNU GPL v3
Rights	https://github.com/HopkinsIDD/COVIDScenarioPipeline/tree/v1.0.0#tools-for-using-this-repository
HTTP Status Code	200
HTTP Checked On	2025/04/14