Items corresponding to entire populations or subpopulations. Might be geographically or temporally temporally limited.

population

Items referring to sequence-level data, including genomics, microbiomics, proteomics, etc.

molecular

R package for statistical inference on panel partially observed Markov processes (alpha release version).

non-collection specific

(Simple) Released

English

Center for Inference and Dynamics of Infectious Disease

panelPomp

Descriptors of the behavior of an outbreak

modeling

Modeling

Predicted value of key outbreak parameters, including (but not limited to) fatality rate, R_0, etc.

parameter estimation

Parameter Estimation

An algorithm that models the progress of a transmissible disease in a population.

disease transmission model

Disease Transmission

Projections of outbreak behavior into some future time, determined relative to a defined starting point. Might include retrospective projects or projections for current activitiy (known as "now-casting").

forecasting

Forecasting

Forecasts based on SIR (Susceptible, Infected, Recovered) models or any of the many variants of this basic famework.

compartmental models

Compartmental Models

modeling purpose

Modeling Purpose

The method or type of model used to achieve the purpose.

modeling method

Modeling Method

a statistical model is an information content entity which is a formalization of relationships between variables in the form of mathematical equations. A statistical model describes how one or more random variables are related to one or more other variables. The model is statistical as the variables are not deterministically but stochastically related.

statistical model

Statistical Model

Software is a plan specification composed of a series of instructions that can be interpreted by or directly executed by a processing unit.

software

The 'about' property contains mixed types: DefinedTerm objects represent subject matter/topics, while Place objects represent geographical scope or applicability

about-property-structure

Apache 2.0

Schema.org vocabulary for structured data on the web

Schema.org

Dublin Core Metadata Initiative Terms - refined elements for precise resource description

DCMI Metadata Terms

Provenance, Authoring and Versioning ontology for metadata about web resources

PAV Ontology

W3C Provenance Ontology for describing provenance information

PROV Ontology

Custom MIDAS vocabulary for epidemiological data and modeling

MIDAS Metadata Vocabulary

Health Level 7 Fast Healthcare Interoperability Resources

HL7 FHIR

Systematized Nomenclature of Medicine Clinical Terms

SNOMED Clinical Terms

LOINC database for laboratory and clinical observations

Logical Observation Identifiers Names and Codes

OBO Foundry ontologies for life sciences and biomedical research

Open Biological and Biomedical Ontology

JSON Schema (Draft 2020-12) defining the structure of MIDAS Catalog JSON-LD metadata records

MIDAS Catalog JSON-LD Schema

Landing page where users can browse and download dataset files in various formats.

Identifier	URL: https://github.com/cbreto/panelPomp
Type	Software
Topics/About	Modeling Modeling Method Compartmental Models Statistical Model Modeling Purpose Disease Transmission Forecasting Parameter Estimation
Language	English
Accessible For Free	TRUE
Biological Scale	population, molecular
File Format	R
Version	ongoing
HTTP Status Code	200
HTTP Checked On	2026/02/22